The identification of positive clones in a general inhibitor model

نویسندگان

  • Frank K. Hwang
  • F. H. Chang
چکیده

In using pooling designs to identify clones containing a specific subsequence called positive clones, sometimes there exist nonpositive clones which can cancel the effect of positive clones. Various models have been studied which differ in the power of cancellation. Although the various models pose interesting mathematical problems, and ingenious constructions of pooling designs have been proposed, in practice we rarely are sure about the true model and thus about which pooling design to use. In this paper we give a pooling design which fits all inhibitor models, and does not use more tests than in the more specific models. In particular, we obtain a 1-round pooling design for the k-inhibitor model for which only sequential designs are currently known. © 2007 Elsevier Inc. All rights reserved.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Identification and Classification Problems on Pooling Designs for Inhibitor Models

Pooling designs are common tools to efficiently distinguish positive clones from negative clones in clone library screening. In some applications, there is a third type of clones called "inhibitors" whose effect is in a sense to obscure the positive clones in pools. Various inhibitor models have been proposed in the literature. We address the inhibitor problems of designing efficient nonadaptiv...

متن کامل

Comparison of genetic diversity and growth traits among Fangzheng silver crucian carp (Carassius auratus gibelio) gynogenetic clones

The silver crucian carp (Carassius auratus gibelio), a gynogenetic teleost, is a promising model for the study of evolutionary genetics in vertebrates. We identified ten gynogenetic clones (FZ-I~FZ-X) from triploid silver crucian carp, collected from Fangzheng County in Heilongjiang Province, China, using microsatellite markers. The genetic diversity of these gynogenetic clones was analyzed usi...

متن کامل

Comparison of genetic diversity and growth traits among Fangzheng silver crucian carp (Carassius auratus gibelio) gynogenetic clones

The silver crucian carp (Carassius auratus gibelio), a gynogenetic teleost, is a promising model for the study of evolutionary genetics in vertebrates. We identified ten gynogenetic clones (FZ-I~FZ-X) from triploid silver crucian carp, collected from Fangzheng County in Heilongjiang Province, China, using microsatellite markers. The genetic diversity of these gynogenetic clones was analyzed usi...

متن کامل

Vicious Cycle of Multiple Invasive Treatments in a Hemophilic Inhibitor Positive Child with Resistant Knee Flexion Contracture, A Case Report

  Uncontrolled recurrent hemarthrosis can end to contracture, deformity, pain, joint destruction and gait disorders which are disabling. We are going to report a challenge, a unilateral knee flexion contracture in a child with severe hemophilia A and inhibitor who underwent different treatment options with unsatisfactory improvement of knee range of motion. Mismanaging postoperatively, patient ...

متن کامل

Puzzling Peptides from a Phage Display Library

The commercial availability of random peptide libraries displayed on the M13 phage is increasing their use forstudies on epitope identification, enzyme inhibitors, receptor ligands, etc. In this study two experimentswhere planned for selection of peptides. First with sheep antibodies, the positive selector was IgG, preparedon Protein G column from a pool of 11 sheeps immunized...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • J. Comput. Syst. Sci.

دوره 73  شماره 

صفحات  -

تاریخ انتشار 2007